Consolidated algorithms for biomarker discovery

 

Here we report three widely employed and consolidated algorithms for biomarker discovery. The data must be acquired by means of liquid chromatography mass spectrometry. They are all open source and can be freely downloaded and used:
mzmine on Java platform. Data extraction can be strongly personalized.

  • mzmine on Java platform. Data extraction can be strongly personalized.
  • XCMS on R platform. Extract only high frequent data having a good chromatographic profile.
  • apLCMS on R platform. Extract an all signal even that at low intensity.

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